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Welcome to the 2025 RMACC HPC Symposium!
Type: Technical Talk clear filter
Wednesday, May 21
 

10:30am MDT

AI enabled protein interaction modeling
Wednesday May 21, 2025 10:30am - 11:00am MDT
AI assisted protein interaction modeling, pioneered by AlphaFold and RosettaFold, has become more diverse both with respect to the programs that do it, and how users run these programs. In this talk, we will cover the programs that are supported at the University of Utah, namely Alphafold2, Alphafold3, Colabfold, Boltz1, RFDiffusion and other tools from the Baker lab, the choices we have made with their deployment, and our experiences with using them. With respect to the ways to run, we will go over the standard SLURM scripts to run Alphafold in two stages (CPU only MSA search, GPU accelerated inference), use Colabfold server for faster MSA search, and using Google Colab running on compute nodes for interactive modeling in a notebook interface. Attendees should leave this talk with ideas how to set up and support these tools and contacts to UofU staff for further questions.
Speakers
Wednesday May 21, 2025 10:30am - 11:00am MDT
Room 206

3:00pm MDT

NAIRR Talk
Wednesday May 21, 2025 3:00pm - 3:30pm MDT
Speakers
Wednesday May 21, 2025 3:00pm - 3:30pm MDT
Wolf Law Courtroom

4:30pm MDT

 Ethics, Bias and AI
Wednesday May 21, 2025 4:30pm - 5:00pm MDT
Speakers
Wednesday May 21, 2025 4:30pm - 5:00pm MDT
Room 206
 
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